SeqUnwinder results (simulateOverlap_sequnwinder_05092017)

SeqUnwinder version 0.1.2 run completed on: 2017/05/09 18:44:29 with arguments: --out simulateOverlap_sequnwinder_05092017 --threads 10 --debug --memepath /Users/akshaykakumanu/Softwares/src/bin/bin/ --geninfo mm10.info --seq /Users/akshaykakumanu/genome/mm10.fa --genseqs simulateOverlap.seqs --win 150 --mink 4 --maxk 5 --r 10 --x 3 --maxscanlen 15

Error on training data

Class	TP Rate	FP Rate	Precision	Recall	F-Measure	MCC	ROC Area	PRC Area
X#B	0.725	0.067	0.683	0.725	0.704	0.643	0.935	0.736
Y#A	0.628	0.063	0.665	0.628	0.646	0.578	0.911	0.712
X#A	0.645	0.074	0.637	0.645	0.641	0.568	0.906	0.718
Y#C	0.673	0.055	0.708	0.673	0.69	0.63	0.911	0.757
X#C	0.746	0.05	0.749	0.746	0.748	0.697	0.951	0.803
Y#B	0.626	0.082	0.604	0.626	0.615	0.536	0.896	0.678

Stratified cross-validation

Class	TP Rate	FP Rate	Precision	Recall	F-Measure	MCC	ROC Area	PRC Area
X#B	0.378	0.083	0.475	0.378	0.421	0.324	0.801	0.442
Y#A	0.499	0.075	0.572	0.499	0.533	0.448	0.846	0.579
X#A	0.609	0.118	0.509	0.609	0.555	0.459	0.862	0.575
Y#C	0.635	0.085	0.598	0.635	0.616	0.536	0.88	0.647
X#C	0.497	0.076	0.568	0.497	0.53	0.445	0.857	0.578
Y#B	0.583	0.123	0.487	0.583	0.531	0.429	0.857	0.551